Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877601.1_cds_XP_016436519.1_32371
CDS Infomation

[gene=LOC107762660] [db_xref=GeneID:107762660] [protein=laccase-12-like] [partial=5'] [protein_id=XP_016436519.1] [location=join(<5..96,216..460,596..724,876..1832,2135..2265)] [gbkey=CDS]
Sequence

CAATTCCCTGGACCAACATTAGAAGTAAACAACGGGGATACTCTAGTTGTCAACGTTGTA
AATAAAGCTCGATATAATGTCACGATTCACTGGCATGGGGTAAGGCAAATGAGAACAGGA
TGGGCGGATGGACCAGAATTTGTTACACAATGCCCAATTAGACCAGGAAAGAGTTACACT
TACCGGTTTACAATTCAAGGACAGGAAGGGACTCTATGGTGGCACGCTCACAGCTCATGG
CTCAGGGCTACGGTTTATGGAGCTCTAATTATCCATCCGAAAGAAGGAGAATCCTATCCA
TTTGCTAAGCCGAAAAGAGAAACACCAATTATGCTTGGTGAGTGGTGGGATGCAAACCCT
ATGGACGTTATAAGACGAGCTACAAGAACAGGAGCAGCTCCTAATGTATCTGATGCATAC
ACCATCAATGGTCAACCAGGTGATCTCTACAAGTGTTCCAGCCAAGATACCACCATAGTC
CCTGTGGACTCGGGCGAAACCAACCTCCTCCGAGTTATCAACGCTGCACTCAACCAACAA
CTTTTCTTTTCCGTGGCCAACCACAAACTTACTGTTGTTGGAGCAGATGCCTCTTATGTT
AAGCCCTTCACTACATCAGTCCTTATGCTCGGACCAGGCCAGACAACTGATGTCCTAATC
ACAGCTGATCAGCAACCAGCTAGATATTACATGGCAGCACGTGCCTACGCAAGCGCTCAA
GGCAACCCCTTTGATAATACCACAACCACAGCAATCCTTGAGTACAAGACAGCTTCTTGT
TCTTCCAATTGTGTCAAGACTAATCCAGTTTCCCCATCTTTACCAGCATTTAACGACACA
GCCACAGCTACAGCCTTCACAACCAAATTCAGAAGCCCAAGAAAGGTCGAGGTACCCACT
GAAATCGACGAAAATCTATTCTTCACAGTCGGGCTAGGACTCAACAACTGCCCAAGAGGC
GCTCGCTCCAGAAACTGTCAAGGTCCGAATGGAACTCGATTCACAGCCAGTATGAACAAT
GTATCTTTTGTTCTACCATCCAACTATTCCCTTCTACAAGCACATCAGCAAGGCATACCT
GGTGTTTTCTCAACTGATTTCCCAGCAAATCCTCCTGTAAAATTTGATTACACCGGTAAT
GTAAGCCGATCACTATGGCAACCTACTCGAGGAACGAAACTATACAAGTTGAAATATGGG
GCAAGAGTGCAAGTTGTGTTACAGGGGACAAGTATCTTCACTGCTGAAAACCATCCAATT
CATCTTCACGGATATGATTTTTACATCATTGCAGAGGGTTTTGGTAACTTTAATCCAAAA
ACAGATACAGCTAAATTCAACCTTGTTGATCCACCTCTCAGAAACACGGCCAGTGTACCC
GTCAAAGGATGGGCGGTCATCAGATTTGTCGCAGACAATCCAGGAGTTTGGCTAATGCAT
TGTCACCTGGATGTTCACATTGGCTGGGGTTTGGCAATGGCGTTCATCGTCGAAAATGGA
GTTACTCAATTGGAATCATTGGAGGCTCCTCCAGTAGATTTGCCTGTCTGTTAA

Peptide Sequence

PEP ID

XP_016436519.1
PEP Infomation

PREDICTED: laccase-12-like, partial [Nicotiana tabacum]
Sequence

QFPGPTLEVNNGDTLVVNVVNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGKSYT
YRFTIQGQEGTLWWHAHSSWLRATVYGALIIHPKEGESYPFAKPKRETPIMLGEWWDANP
MDVIRRATRTGAAPNVSDAYTINGQPGDLYKCSSQDTTIVPVDSGETNLLRVINAALNQQ
LFFSVANHKLTVVGADASYVKPFTTSVLMLGPGQTTDVLITADQQPARYYMAARAYASAQ
GNPFDNTTTTAILEYKTASCSSNCVKTNPVSPSLPAFNDTATATAFTTKFRSPRKVEVPT
EIDENLFFTVGLGLNNCPRGARSRNCQGPNGTRFTASMNNVSFVLPSNYSLLQAHQQGIP
GVFSTDFPANPPVKFDYTGNVSRSLWQPTRGTKLYKLKYGARVQVVLQGTSIFTAENHPI
HLHGYDFYIIAEGFGNFNPKTDTAKFNLVDPPLRNTASVPVKGWAVIRFVADNPGVWLMH
CHLDVHIGWGLAMAFIVENGVTQLESLEAPPVDLPVC

Transcript Sequence

Gene sequence data has not been registered.